SNP Profiles matching PLAYA ALTA 2 [VEN]

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_Input profile	CT	CC	CC	GG	CT	AA	AA	CC	AG	CC	AA	GG	AT	CC
1._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
2._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
3._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
4._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
5._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
6._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
7._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
8._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
9._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
10._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
11._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	CC	AG	CC	_	_	AT	_
12._PLAYA_ALTA_2_[VEN]	_	_	CC	GG	CT	_	AA	_	AG	CC	_	_	AT	_
13._GC-08-173-4-16	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC
14._GC-04-017-1-17	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC
15._GC-04-017-1-17	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC
16._GC-04-017-1-17	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC
17._GC-04-017-1-17	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC
18._GC-04-017-1-17	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC
19._GC-08-173-4-16	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC
20._GC-08-173-4-16	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC
21._GC-08-173-4-16	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC
22._GC-08-173-4-16	CT	CC	CC	GG	CT	AG	AA	CC	AG	CC	AA	GG	AT	CC

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	GG	CC	CT	TT	CC	AA	TT	TT	CT	GG	GG	GT	AA	CG
1._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
2._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
3._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
4._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
5._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
6._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
7._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
8._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
9._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
10._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
11._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
12._PLAYA_ALTA_2_[VEN]	GG	CC	CT	TT	CC	AC	_	TT	_	GG	_	_	_	CG
13._GC-08-173-4-16	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	AA	CG
14._GC-04-017-1-17	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	AA	CG
15._GC-04-017-1-17	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	AA	CG
16._GC-04-017-1-17	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	AA	CG
17._GC-04-017-1-17	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	AA	CG
18._GC-04-017-1-17	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	AA	CG
19._GC-08-173-4-16	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	AA	CG
20._GC-08-173-4-16	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	AA	CG
21._GC-08-173-4-16	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	_	CG
22._GC-08-173-4-16	GG	CC	CT	TT	CC	AC	TT	TT	CC	GG	GG	GT	AA	CG

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	CC	CC	GG	AA	CT	GG	AG	AT	TT	CT	CC	CC	GG	AG
1._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
2._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
3._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
4._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
5._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
6._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
7._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
8._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
9._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
10._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
11._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	_	_	_	CC	GG	AG
12._PLAYA_ALTA_2_[VEN]	_	CC	_	AA	CT	_	_	_	TT	_	_	CC	GG	AG
13._GC-08-173-4-16	CC	CC	_	AA	CT	GG	AG	AT	TT	TT	CC	CC	GG	AG
14._GC-04-017-1-17	CC	CC	AG	AA	CT	GG	AG	AT	TT	TT	CC	CC	GG	AG
15._GC-04-017-1-17	CC	CC	AG	AA	CT	GG	AG	AT	TT	TT	CC	CC	GG	AG
16._GC-04-017-1-17	CC	CC	AG	AA	CT	GG	AG	AT	TT	TT	CC	CC	GG	AG
17._GC-04-017-1-17	CC	CC	AG	AA	CT	GG	AG	AT	TT	TT	CC	CC	GG	AG
18._GC-04-017-1-17	CC	CC	AG	AA	CT	GG	AG	AT	TT	TT	CC	CC	GG	AG
19._GC-08-173-4-16	CC	CC	AG	AA	CT	GG	AG	AT	TT	TT	CC	CC	GG	AG
20._GC-08-173-4-16	CC	CC	AG	AA	CT	GG	AG	AT	TT	TT	CC	CC	GG	AG
21._GC-08-173-4-16	CC	CC	AG	AA	CT	GG	AG	AT	TT	TT	CC	CC	GG	AG
22._GC-08-173-4-16	CC	CC	AG	AA	CT	GG	AG	AT	_	TT	CC	CC	GG	AG

Input profile: PLAYA_ALTA_2_[VEN] RUQ_232

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

1._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 4117 4

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

2._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 4117 5

Dapeng Zhang, 2016

3._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 4117 6

Dapeng Zhang, 2016

4._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 4117 7

Dapeng Zhang, 2016

5._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 4117 8 > FP

Dapeng Zhang, 2016

6._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8416 7

Dapeng Zhang, 2016

7._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8416 8

Dapeng Zhang, 2016

8._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: 8416 9

Dapeng Zhang, 2016

9._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8416 11

Dapeng Zhang, 2016

10._PLAYA_ALTA_2_[VEN]

97.9 %
24 shared markers

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Malaysian Cocoa Board (MCB), Malaysia

Location: C0303

Dapeng Zhang, 2016

11._PLAYA_ALTA_2_[VEN]

97.8 %
23 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8416 10

Dapeng Zhang, 2016

12._PLAYA_ALTA_2_[VEN]

97.8 %
23 shared markers

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Centro Agronómico Tropical de Investigación y Enseñanza (CATIE), Costa Rica

Location: Cabiria

Dapeng Zhang, 2016

13._PLAYA_ALTA_2_[VEN] GC-08-173-4-16

95.1 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

14._PLAYA_ALTA_2_[VEN] GC-04-017-1-17

94 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

15._PLAYA_ALTA_2_[VEN] GC-04-017-1-17

94 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 5

Notes: 5

16._PLAYA_ALTA_2_[VEN] GC-04-017-1-17

94 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

17._PLAYA_ALTA_2_[VEN] GC-04-017-1-17

94 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

18._PLAYA_ALTA_2_[VEN] GC-04-017-1-17

94 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8 > FP4

19._PLAYA_ALTA_2_[VEN] GC-08-173-4-16

94 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

20._PLAYA_ALTA_2_[VEN] GC-08-173-4-16

94 %
42 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

21._PLAYA_ALTA_2_[VEN] GC-08-173-4-16

93.9 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 8

Notes: 8

22._PLAYA_ALTA_2_[VEN] GC-08-173-4-16

93.9 %
41 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 10

Notes: 10

Key to SNP Markers

Key to SNP Markers

1	TcSNP75	2	TcSNP90	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP174	7	TcSNP193	8	TcSNP226	9	TcSNP230	10	TcSNP242
11	TcSNP329	12	TcSNP364	13	TcSNP372	14	TcSNP448	15	TcSNP469
16	TcSNP529	17	TcSNP534	18	TcSNP560	19	TcSNP577	20	TcSNP591
21	TcSNP602	22	TcSNP619	23	TcSNP702	24	TcSNP723	25	TcSNP731
26	TcSNP799	27	TcSNP823	28	TcSNP872	29	TcSNP878	30	TcSNP891
31	TcSNP899	32	TcSNP998	33	TcSNP1060	34	TcSNP1063	35	TcSNP1111
36	TcSNP1126	37	TcSNP1253	38	TcSNP1309	39	TcSNP1439	40	TcSNP1442
41	TcSNP1458	42	TcSNP1484